Documents and Reports
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Jump to Topic: Aquatic Habitat Institute | Aquatic Pesticides | Biological Invasions | Contaminant Monitoring & Research | Historical Ecology | Regional Monitoring Program | Watersheds | Wetlands
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See also: Peer-Reviewed Articles by SFEI Scientists and Affiliates
Aquatic Habitat Institute reports |
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Title | Author | Year | Link |
SFEI Program |
| A Workshop on Toxicity Identification Evaluation (TIE's) in the San Francisco Bay Region: Lessons Learned | San Francisco Bay-Delta Aquatic Habitat Institute | 1993 | AHI | |
| Keynote Address for AHI Workshop on TIE's Status of TIE's as a Regulatory Tool in S.F. Bay Region | Aquatic Habitat Institute | 1993 | AHI | |
| Proceedings of a Workshop on Chronic Toxicity Identification Evaluations in the San Francisco Bay Region | Aquatic Habitat Institute | 1992 | AHI | |
| Status And Trends Report On Pollutants In The San Francisco Estuary | San Francisco Bay-Delta Aquatic Habitat Institute | 1991 | AHI | |
| San Francisco Estuary Project Status and Trends Report on Pollutants in the San Francisco Estuary, Final Draft | Davis, J.A.; Gunther, A.; Richardson, B.J.; O'Connor, J.; Spies, R.B.; Wyatt, E.; Larson, E.; Meiorin, E.C. | 1991 | AHI | |
| Evaluation of Turbidity and Turbidity Related Effects on the Biota of the San Francisco Bay-Delta Estuary | O'Connor, J. M. | 1991 | AHI | |
| Estuarine Data Index: A Guide to Bay-Delta Research and Monitoring Programs, Volume I | Aquatic Habitat Institute | 1990 | AHI | |
| Estuarine Data Index: A Guide to Bay-Delta Research and Monitoring Programs, Volume 2 | Aquatic Habitat Institute | 1990 | AHI | |
| Inventory of Monitoring Programs in the San Francisco Bay and Delta | Kramer, K. S. | 1989 | AHI | |
| Inventory of Priority Datasets Relating to the San Francisco Estuary | Davis, J. | 1988 | AHI | |
| A Survey of User Needs for Data Relating to Environmental and Water Quality in the San Francisco Estuary | Kramer, K. S.; Phillips, J. H. | 1988 | AHI | |
| Monitoring of Toxic Contaminants in the San Francisco Bay-Delta: A Critical Review, Emphasizing Spatial and Temporal Trend Monitoring | Phillips, D. J. H. | 1988 | AHI | |
| An Assessment of The Loading of Toxic Contaminants to The San Francisco-Bay Delta: Full Report | Gunther, A.; Davis, J.; Phillips, D. J. H. | 1987 | AHI | |
| An Assessment of The Loading of Toxic Contaminants to The San Francisco-Bay Delta: Executive Summary | Gunther, A.; Davis, J.; Phillips, D. J. H. | 1987 | AHI | |
| Toxic Contaminants in the San Francisco Bay-Delta and their Possible Biological Effects | Phillips, D. J. H. | 1987 | AHI |
Aquatic Pesticide Monitoring Program reports |
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Title | Author | Year | Link |
SFEI Program |
| Hg L 3 XANES study of mercury methylation in shredded Eichhornia crassipes | Michael Rajan; Jeannine Darrow; Michael Hua; Brandy Barnett; Miguel Mendoza; Ben K. Greenfield; Joy C. Andrews | 2008 | CMR APMP | |
| Assessment of Potential Aquatic Herbicide Impacts to California Aquatic Ecosystems. | Siemering, G.; Hayworth, J. D.; Greenfield, B. K. | 2008 | CMR APMP | |
| Mechanical shredding of water hyacinth (Eichhornia crassipes): Impacts to water quality in the Sacramento-San Joaquin River Delta, California | Greenfield, B.; Siemering, G.; Andrews, J.C.; Rajan, M.; Andrews Jr., S.P.; Spencer, D.F. | 2007 | APMP CMR | |
| Evaluating impacts of Lake Maid plant control | David, N.; Greenfield, B. K.; Siemering, G. S. | 2006 | APMP | |
| Control costs, operation, and permitting issues for non-chemical plant control: case studies in the San Francisco Bay-Delta Region, California. | Greenfield, B.K.; Blankinship, M; McNabb, T.P | 2006 | APMP | |
| Evaluation of water hyacinth survival and growth in the Sacramento Delta, California following cutting | Spencer, D. F.; Ksander, G.G.; Donovan, M.J.; Liow, P.S.; Chan, W.K.; Greenfield, B.K.; Shonkoff, S.B.; Andrews, S.P. | 2006 | CMR APMP | |
| Aquatic Pesticides Monitoring Program Nonchemical Alternatives Year 3 Final Report | Greenfield, B.; David, N.; Siemering, G.; McNabb, Thomas P.; Spencer, D. F.; Ksander, G. G.; Donovan, M. J.; Liow, P. S.; Chan, W. K.; Shonkoff, S. B.; Andrews, S.; Howard, V.; Sytsma, M. | 2005 | APMP | |
| Aquatic Pesticides Monitoring Program Phase 3 (2005) Bioassessment of Waterbodies Treated With Aquatic Pesticides | Hayworth, J.; Melwani, A. | 2005 | APMP | |
| Aquatic Pesticides Monitoring Program Monitoring Project Final Report | Siemering, G. | 2005 | APMP | |
| Aquatic Pesticides Alternatives Literature Review, Review of Alternative Aquatic Pest Control Methods For California Waters | David, Nicole; Greenfield, Ben K.; Hunt, Jennifer; Siemering, Geoffrey; Wittmann, Marion | 2004 | APMP | |
| UC Santa Barbara Graduate Project Report: "A Cost and Environmental Analysis of Aquatic Plant Management in California" | Frieman, Geoff M.; Lehman, Garrett V.; Quinn, Julie D.; Wittmann, Marion E. | 2004 | PDF HTML | APMP |
| Review of Alternative Aquatic Pest Control Methods For California Waters | Greenfield, B.K.; David, N.; Hunt, J.; Wittmann, M.; Siemering, G. | 2004 | APMP CMR | |
| Field Evaluations of Alternative Pest Control Methods in California Waters | San Francisco Estuary Institute (SFEI); Blankinship and Associates; Marin Municipal Water District; Reclamation District 999; and Contra Costa County Public Works Department; Greenfield, B.K. | 2004 | APMP | |
| Does shredding water hyacinths affect mercury speciation? | Hua, M.; Rajan, M.; Hackett, A.; Darrow, J.; Andrews, J.C.; Greenfield, B.K. | 2004 | APMP CMR | |
| Determining Economic Impacts of Aquatic Plant Management in California Waters | Mann, R.; Wittmann, M. | 2004 | APMP | |
| Field Evaluations of Alternative Pest Control Methods in California Waters | San Francisco Estuary Institute; Blankinship and Associates; Marin Municipal Water District; Reclamation District 999; Contra Costa County Public Works Department | 2004 | APMP | |
| Aquatic Pesticides Monitoring Program Phase 3 (2004) Monitoring Project Report | Siemering, G.; Hayworth, J.; Melwani, A.; Crane, D.; Mekebri, A.; Blondina, G.; Schlenk, D.; Xie, L.; Irwin, M.A.; Berry, K.; Greenfield, B.K.; Thrippleton, K. | 2004 | APMP | |
| Aquatic Pesticides Monitoring Program Quality Assurance Program Plan | Yee, D.; Siemering, G.; Hayworth, J.; Oros, D.; Lowe, S.; Davis, J. | 2004 | APMP | |
| Aquatic Pesticides Alternatives Demonstration Project Report | Blankinship and Associates, Davis, CA; Contra Costa County Public Works Department, Martinez, CA; Marin Municipal Water District, Corte Madera, CA; Reclamation District 999, Clarksburg, CA; San Francisco Estuary Institute | 2004 | APMP | |
| APMP Alternatives Program Executive Summary | Greenfield, B.K. | 2004 | APMP CMR | |
| Aquatic Pesticides Alternatives Executive Summary | Greenfield, Ben K. | 2004 | APMP | |
| Review of Alternative Aquatic Pest Control Methods For California Waters | Greenfield, B.; David, N.; Hunt, J.; Wittmann, M.; Siemering, G. | 2004 | APMP | |
| APMP Alternatives Program Executive Summary | Greenfield, B. | 2004 | APMP | |
| Phase 2 (2003) Bioassessment of Waterbodies Treated with Aquatic Pesticides | Hayworth, Jennifer; David, N.; Shonkoff, S.B. | 2004 | APMP | |
| A Proposed Lentic Benthic Bioassessment Procedure for California (Protocol Brief for Biological Sampling in Lakes, Reservoirs, and Ponds) | Hayworth, J. | 2004 | APMP | |
| Aquatic Pesticides Monitoring Program Phase 2 (2003) Monitoring Project Report | Siemering, G. | 2004 | APMP | |
| Review of Alternative Aquatic Pest Control For California Waters | Greenfield, B.; David, N.; Hunt, J.; Wittmann, M.; Siemering, G. | 2004 | APMP | |
| Non-Chemical Aquatic Plant Control (presented at NorCAl SETAC 2003 Conference) | David, N.; Greenfield, B.; Siemering, G. | 2003 | PPT | APMP |
| A new research program on non-chemical pest control in California waters | Greenfield, B.K.; David, N.; Siemering, G. | 2003 | APMP CMR | |
| Aquatic Pesticide Monitoring Program Literature Review | Siemering, G.; David, N.; Hayworth, J.; Franz, A.; Malamud-Roam, Frances | 2003 | APMP | |
| Aquatic Pesticide Monitoring Program Modeling Workgroup Final Report | Wadley, A.; Hunt, J.; Young, T.; Malamud-Roam, K.; Oros, D. | 2003 | APMP |
Biological Invasions reports |
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Title | Author | Year | Link |
SFEI Program |
| Exotic Oyster Survey, Removal and Research in San Francisco Bay: Annual Progress Report | Cohen, A.; Weinstein, A. | 2008 | BI | |
| Tanaidacea in The Light & Smith Manual: Intertidal Invertebrates of the California and Oregon Coast. | Cohen, A.N.; J.T. Carlton | 2007 | HTML | BI |
| Potential Distribution of Zebra Mussels (Dreissena polymorpha) and Quagga Mussels (Dreissena bugensis) in California Phase 1 Report. A Report for the California Department of Fish and Game | Cohen, A.N. | 2007 | BI | |
| Shellfish Beds in Report on the Subtidal Habitats and Associated Biological Taxa in San Francisco Bay | Cohen, A.N; Cosentino-Manning, N.; Schaeffer, K. | 2007 | Link | BI |
| Preventing the introduction of non-native species with imported oyster shell used for cultch in restoration projects: an inspection, and consideration of future protocols | Cohen, A.N.; Zabin, C.J. | 2007 | BI | |
| The colonial ascidian Didemnum sp. A: Current distribution, basic biology, and potential threat to marine communities of the northeast and west coasts of North America | Bullard, S.G.; Lambert, G.; Carman, M.R.; J.Byrnes; Whitlatch, R.B.; Ruiz, G.; Miller, R.J.; Harris, L.; Valentine, P.C.; Collie, J.S.; Pederson, J.; McNaught, D.C.; Cohen, A.N.; Asch, R.G.; Dijkstra, J.; Heinonen, K. | 2007 | BI | |
| Phytoplankton and bacterial assemblages in ballast water of U.S. military ships as a function of port of origin, voyage time, and ocean exchange practices. | Burkholder, J.M; Hallegraeff, G.M; Melia, G.; Cohen, A.N.; Bowers, H.A.; Oldach, D.W.; Parrowa, M.W.; Sullivan, M.J.; Zimba, P.V.; Allen, E.H.; Mallin, M.A. | 2007 | BI | |
| California's Response to the Zebra/Quagga Mussel Invasion in the West. Recommendations of the California Science Advisory Panel, for the California Incident Command (California Department of Fish and Game, California Department of Water Resources, U.S. Fish and Wildlife Service, California Department of Food and Agriculture, and California Department of Boating and Waterways) | Cohen, A.; Moll, R.; Carlton, J.T.; O'Neil, Jr.,C.R.; Anderson, L.; Moyle, P.B. | 2007 | BI | |
| Introduced Marine and Estuarine Invertebrates | Carlton, J.T.; Cohen, A.N.; J.T. Carlton | 2007 | HTML | BI |
| The Panama Canal: Cutting a canal through Central America | Cohen, A.N.; S. Gollasch; B.S. Galil; A.N. Cohen | 2006 | Link | BI |
| The Panama Canal: Species Introductions and the Panama Canal | Cohen, A.N.; Gollasch, S.; Galil, B.S.; Cohen, A.N. | 2006 | Link | BI |
| Environmental threats to tidal marsh vertebrates of the San Francisco Bay Estuary | Takekawa, J.Y.; Woo, I.; Spautz, H.; Nur, N.; Grenier, J.L.; Malamud-Roam, K.; Nordby, J.C.; Cohen, A.N.; Malamud-Roam, F.; Wainwright-De La Cruz, S.E. | 2006 | BI WL | |
| Bridging Divides: Maritime Canals as Invasion Corridors | Gollasch, S.; Galil, B.S.; Cohen, A.N. | 2006 | Link | BI |
| Inspection for Live Marine Invertebrates in an Oyster Shell Pile at Drakes Bay Oyster Company | Cohen, A.N.; Zabin, C.J. | 2006 | BI | |
| Guide to the Exotic Species of San Francisco Bay | Cohen, A.N. . . At: http://www.exoticsguide.org. San Francisco Estuary Institute, Oakland, CA. | 2005 | BI | |
| Ballast Water Discharge Standards: Report and Recommendation of the California Advisory Panel on Ballast Water Performance Standards. | Holmes, M.; Bolland, D.; Cohen, A.N.; Fox, A.; Herod, J.; Jennings, W.; Moore, S.; Newkirk, S.; Ruiz, G.; Simkanin, C.; Talley, D.; Ward, K. | 2005 | BI | |
| Rapid Assessment Shore Survey for Exotic Species in San Francisco Bay - May 2004 | Cohen, A.N.; Calder, D.R.; Carlton, J.T.; Chapman, J.W.; Harris, L.H.; Kitayama, T.; Lambert, C.C.; Lambert, G.; Piotrowski, C.; Shouse, M.; Solórzano, L.A. | 2005 | BI | |
| Rapid Assessment Channel Survey for Exotic Species in San Francisco Bay - November 2005 | Cohen, A.N.; Chapman, J.W. | 2005 | BI | |
| Overview of 2004/05 Rapid Assessment Shore and Channel Surveys for Exotic Species in San Francisco Bay | Cohen, A.N. | 2005 | BI | |
| Rapid Assessment Survey for Exotic Organisms in Southern California Bays and Harbors, and Abundance in Port and Non-port Areas | Cohen, A.N.; Harris, L.; Bingham, B.; Carlton, J.; Chapman, J.; Lambert, C.; Lambert, G.; Ljubenkov, J.C.; Murray, S. N.; Rao, L. C.; Reardon, K.; Schwindt, E. | 2005 | BI | |
| A review of Zebra Mussels' Environmental Requirements | Cohen, A.N.; CA Department of Water Resources | 2005 | BI | |
| Invasions in the sea | Cohen, A.N. | 2004 | BI | |
| An Exotic Species Detection Program for Tillamook Bay | Cohen, A.N. | 2004 | BI | |
| An Exotic Species Detection Program for Puget Sound | Cohen, A.N. | 2004 | BI | |
| An Exotic Species Detection Program for the Lower Columbia River Estuary | Cohen, A.N. | 2004 | BI | |
| Summary of data and analyses indicating that exotic species have impaired the beneficial uses of certain California waters | Cohen, A.N.; Moyle, Peter B. | 2004 | BI | |
| Practical Guidebook to the Control of Invasive Aquatic and Wetland Plants of the San Francisco Bay - Delta Region | May, M.; Grosso, C.; Collins, J. | 2003 | HTML | BI |
| Episodic global dispersal in shallow water marine organisms: The case history of the European shore crabs Carcinus maenas and Carcinus aestuarii | Carlton, J.; Cohen, A.N. | 2003 | BI | |
| On Mitten Crabs and Lung Flukes | Cohen, A.N. | 2003 | BI | |
| Invasion of San Francisco Bay by Smooth Cordgrass, Spartina alterniflora: A Forecast of Geomorphic Effects on the Intertidal Zone | Collins, Joshua N. | 2002 | BI | |
| The release of pest species by marine aquaculture: lessons from a South African parasite introduced into California waters | Cohen, A.N.; A.N. Cohen; S.K. Webb | 2002 | BI | |
| Project Report for the Southern California Exotics Expedition 2000 A Rapid Assessment Survey of Exotic Species in Sheltered Coastal Waters | Cohen, A.N.; Harris, L.H.; Bingham, B.L.; Carlton, J.T.; Chapman, J.W.; Lambert, C.C.; Lambert, G.; Ljubenkov, J.C.; Murray, S. N.; Rao, L. C.; Reardon, K.; Schwindt, E. | 2002 | BI | |
| Asian Kelp Undaria pinnatifida in the northeastern Pacific Ocean | Silva, P.; Woodlield, R.; Cohen, A.N.; Harris, L.H.; Goddard, J. | 2002 | BI | |
| Success factors in the establishment of human-dispersed organisms | Cohen, A.N.; J M Bullock; R E Kenward; R S Hails | 2002 | BI | |
| An Introduction to the San Francisco Estuary | Cohen, A.N. | 2001 | BI | |
| Report of the Washington State Exotics Expedition 2000 | Cohen, A.N.; Berry, H.; Mills, C.; Milne, D.; Britton-Simmons, K.; Wonham, M.; Secord, D.; Barkas, J. A.; Bingham, B.; Bookheim, B.; Byers, J.; Chapman, J. W.; Cordell, J.; Dumbauld, B.; Fukuyama, A.; Harris, L. H.; Kohn, A.; Li, K.; Mumford, T.; Radashevsky, V.; Sewell, A.; Welch, K. | 2001 | BI | |
| Final Draft Master List of NIS Plant Species | Collins, J. | 2001 | BI | |
| Investigations into the Introduction of Non-indigenous Marine Organisms via the Cross-Continental Trade in Marine Baitworms | Cohen, A.N.; Weinstein, A.; Emmett, M. A.; Lau, W.; Carlton, J. | 2001 | BI | |
| Zebra Mussel's Calcium Threshold and Implications for its Potential Distribution in North America | Cohen, A.N.; Weinstein, A. | 2001 | BI | |
| The Potential Distribution of Chinese Mitten Crabs (Eriocheir sinensis) in selected waters of the Western United States with U.S. Bureau of Reclamation Facilities | Cohen, A.N.; Weinstein, A. | 2001 | BI | |
| The regulation of biological pollution: Preventing exotic species invasions from ballast water discharged into California coastal waters | Cohen, A.N.; Foster, B. | 2000 | BI | |
| Invasion by a Japanese marine microorganism in western North America | McGann, M.; Sloan, D.; Cohen, A.N. | 2000 | BI | |
| Combating Bio-Invaders (radio program). NPR's Living on Earth (11-12-99) | Cohen, A.N. | 1999 | HTML | BI |
| Invasions status and policy on the U. S. west coast | Cohen, A.N. | 1999 | BI | |
| The 1998 Puget Sound Expedition: a rapid assessment survey for nonindigenous species in the shallow waters of Puget Sound | Mills, C. E.; Cohen, A.N.; Berry, H.; Wonham, M.; Bingham, B.; Bookheim, B.; Carlton, J. T.; Chapman, J. W.; Cordell, J. R.; Harris, L. H.; Klinger, T.; Kohn, A.; Lambert, C. C.; Lambert, G.; Li, K.; Secord, D.; Toft, J. | 1999 | BI | |
| Extent and impacts of ballast water invasions | Cohen, A.N. | 1999 | BI | |
| Briefing Paper on a Monitoring Plan for Nonindigenous Organisms in the San Francisco Bay/Delta Estuary | Cohen, A.N. | 1999 | BI | |
| Invasive Species in San Francisco Bay (radio program). NPR's Science Friday (1-23-98) | Cohen, A.N. | 1998 | HTML | BI |
| Exotic organisms; California's Emerging Environmental Challenges | Cohen, A.N. | 1998 | BI | |
| Biological invasions and opportunities for their regulation on the west coast of the United States. | Cohen, A.N.; Cassell, J. L.; Olin, P. G. | 1998 | BI | |
| A Rapid Assessment Survey of Nonindigenous Species in the Shallow Waters of Puget Sound | Cohen, A.N.; Mills, C.; Berry, H.; Wonham, M.; Bingham, B.; Bookheim, B.; Carlton, J.; Chapman, J.; Cordell, J.; Harris, L.; Klinger, T.; Kohn, A.; Lambert, C. C.; Lambert, G.; Li, K.; Secord, D.; Toft, J. | 1998 | BI | |
| The potential distribution and abundance of zebra mussels in California | Weinstein, A.; Cohen, A.N. | 1998 | BI | |
| Introduced Tidal Marsh Plants in the San Francisco Estuary: Regional Distribution and Priorities for Control | Grossinger, R.; Alexander, J.; Cohen, A.N.; Collins, J. T. | 1998 | BI | |
| Accelerating invasion rate in a highly invaded estuary | Cohen, A.N.; Carlton, J. T. | 1998 | BI | |
| The Potential Distribution and Abundance of Zebra Mussels in California | Cohen, A.N.; Weinstein, A. | 1998 | BI | |
| The exotic species threat to California's coastal resources | Cohen, A.N. | 1998 | BI | |
| Monitoring for Non-indigenous Organisms | Cohen, A.N. | 1998 | BI | |
| Methods and Data for Analysis of Potential Distribution and Abundance of Zebra Mussels in California | Cohen, A.N.; Weinstein, A. | 1998 | BI | |
| Ships' Ballast Water and the Introduction of Exotic Organisms into the San Francisco Estuary: Current Status of the Problem and Options for Management | Cohen, A.N. | 1998 | BI | |
| Periwinkle's progress: the Atlantic snail Littorina saxatilis (Mollusca: Gastropoda) establishes a colony on a Pacific shore | Carlton, J.; Cohen, A.N. | 1998 | BI | |
| Biological Invasions in Aquatic Ecosystems: Impacts on Restoration and Potential for Control | Cohen, A.N.; Webb, S.K. | 1998 | BI | |
| Petition to list the seaweed Caulerpa taxifolia as a prohibited species under the Federal Noxious Weed Act | Cohen, A.N.; et al.; Bruce Babbit | 1998 | BI | |
| The invasion of the Pacific Coast by the European green crab Carcinus maenas | Cohen, A.N.; Cassell, J. L.; Olin, P. G. | 1998 | BI | |
| The invasion of the estuaries | Cohen, A.N.; Patten, K | 1997 | BI | |
| Transoceanic transport mechanisms: The introduction of the Chinese mitten crab Eriocheir sinensis to California | Cohen, A.N.; Carlton, J. | 1997 | BI | |
| Biological invasions in the estuary | Cohen, A.N. | 1997 | BI | |
| Have claw, will travel | Cohen, A.N. | 1997 | BI | |
| Biological Warfare. MetroNews (5-1-97) | Weir, Christopher | 1997 | HTML | BI |
| Urging Action to control an abalone parasite and prevent other introductions via aquaculture activities. | Cohen, A.N.; et al.; Pete Wilson | 1997 | BI | |
| Chinese mitten crabs in North America | Cohen, A.N. | 1995 | BI | |
| Intruders in the estuary | Cohen, A.N.; Carlton, J.T. | 1995 | BI | |
| Introduction, dispersal and potential impacts of the green crab Carcinus maenas in San Francisco Bay | Cohen, A.N.; Carlton, J.T.; Fountain, M.C. | 1995 | BI | |
| Biological Study Nonindigenous Aquatic Species in a United States Estuary: A Case Study of the Biological Invasions of the San Francisco Bay and Delta | Carlton, J.; Cohen, A.N. | 1995 | HTML | BI |
| Place Invaders | Cohen, A.N. | 1993 | BI | |
| Weeding the garden | Cohen, A.N. | 1992 | BI |
Contaminant Monitoring and Research reports |
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Title | Author | Year | Link |
SFEI Program |
| SWAMP Fact Sheet: Long-Term Monitoring of Pollutants in Fish and Mussels Documents Major Improvements and Persistent Problems | Davis, J.A. | 2008 | CMR | |
| Bioaccumulation Of Pollutants In California Waters: A Review Of Historic Data And Assessment Of Impacts On Fishing And Aquatic Life | Davis, J. A.; Grenier, J. L.; Melwani, A. R.; Bezalel, S. N.; Letteney, E. M.; Zhang, E. J.; Odaya, M. | 2008 | Link Link | CMR |
| Sampling in the Freshwater Reaches of the Lower Delta for the Sediment Quality Objectives Measures | Lowe, S.; Salop, P.; Gehrts, K.; Anderson, B.; Phillips, B. M.; Bay, S. | 2008 | CMR | |
| Sampling in the Freshwater Reaches of the Lower Delta for the Sediment Quality Objectives Measures. UPDATED for CALFED meeting Oct 2008 | Lowe, S.; Salop, P.; Gehrts, K.; Anderson, B.; Phillips, B. M.; Bay, S. | 2008 | CMR | |
| Hg L 3 XANES study of mercury methylation in shredded Eichhornia crassipes | Michael Rajan; Jeannine Darrow; Michael Hua; Brandy Barnett; Miguel Mendoza; Ben K. Greenfield; Joy C. Andrews | 2008 | CMR APMP | |
| The level of agreement among experts applying best professional judgment to assess the condition of benthic infaunal communities | Weisberg, S.B.; Thompson, B.; Ranasinghe, J.A.; Montagne, D. E.; Cadien, D. B.; Dauer, D. M.; Diener, D.; Oliver, J.; Reish, D. J.; Velarde, R. G.; Word, J. Q. | 2008 | CMR RMP | |
| The UC Davis Biosentinel Mercury Program: Using Small Fish to Monitor Fine-scale Patterns of Methylmercury Contamination in the Watershed | Slotten, D.; Davis, J. | 2008 | CMR | |
| Science Support for the Surface Water Ambient Monitoring Program, SWRCB Agreement No. 03-200-250-0 | Hoenicke, R.; Lowe, S.; Davis, J. | 2008 | CMR | |
| Recommendations for a Bioaccumulation Monitoring and Human Health Risk Reduction Program for California | Davis, J. | 2008 | CMR | |
| Assessment of Potential Aquatic Herbicide Impacts to California Aquatic Ecosystems. | Siemering, G.; Hayworth, J. D.; Greenfield, B. K. | 2008 | CMR APMP | |
| Effects of Short-term Water Quality Impacts Due to Dredging and Disposal on Sensitive Fish Species in San Francisco Bay | Jabusch, T.W.; Melwani, A.; Ridolfi, K.; Connor, M. | 2008 | CMR | |
| Grassland Bypass Project Report 2004-2005 | Grassland Bypass Project Oversight Committee | 2008 | CMR | |
| Mercury in sport fish from the Sacramento-San Joaquin Delta region, California | Davis, J.A.; Greenfield, B.K.; Ichikawa, G.; Stephenson, M. | 2008 | CMR | |
| Modeling mercury bioaccumulation in largemouth bass in the Sacramento-San Joaquin River Delta and tributaries | Greenfield, B.K.; Slotton, D. G; Ayers, S.M. | 2007 | CMR | |
| Mechanical shredding of water hyacinth (Eichhornia crassipes): Impacts to water quality in the Sacramento-San Joaquin River Delta, California | Greenfield, B.; Siemering, G.; Andrews, J.C.; Rajan, M.; Andrews Jr., S.P.; Spencer, D.F. | 2007 | APMP CMR | |
| Quality Assurance Project Plan: Investigations of Sources and Effects of Pyrethroid Pesticides in Watersheds of the San Francisco Bay Estuary | Lowe, S.; Anderson, B. | 2007 | CMR | |
| Final Project Report: Investigations of Sources and Effects of Pyrethroid Pesticides in Watersheds of the San Francisco Estuary | Lowe, S.; Anderson, Brian; Phillips, B | 2007 | CMR | |
| California Bay-Delta Authority Fish Mercury Project, Year 2 (2006) Annual Report. Sport Fish Sampling and Analysis | Melwani, A.; Bezalel, S.; Hunt, J.; Grenier, J. L.; Hunt, J. A.; Robinson, A. H; Davis, J. | 2007 | CMR | |
| The Relationship between Landscape Features and Sport Fish Mercury in the Sacramento-San Joaquin Delta Watershed | Melwani, A. R.; Bezalel, S. N.; Grenier, L. G.; Hunt, J. A.; Robinson, A. H., and; Davis, J. A. | 2007 | CMR | |
| Indicators of Anthropogenic Contamination in the Estuary | Thompson, B.; Melwani, A.; Lowe, S.; Greenfield, B; Robinson, A. | 2007 | CMR | |
| Water Quality Improvements are Critical to Waterfront Devleopment: Lessons from Boston, San Francisco and Kitakyushu | Connor, M. | 2006 | CMR | |
| Quantitative Determination of Pyrethroids, Pyrethrins, and Piperonyl Butoxide in Surface Water by High Resolution Gas Chromatography/High Resolution Mass Spectrometry | Woudneh, M.; Oros, D. | 2006 | CMR | |
| Evaluation of water hyacinth survival and growth in the Sacramento Delta, California following cutting | Spencer, D. F.; Ksander, G.G.; Donovan, M.J.; Liow, P.S.; Chan, W.K.; Greenfield, B.K.; Shonkoff, S.B.; Andrews, S.P. | 2006 | CMR APMP | |
| Technical Report for the Interagency Ecological Program (IEP) Pelagic Organism Decline (POD) Workgroup: Tier 1 Risk Assessment of California Department of Boating and Waterways Aquatic Herbicide Use in the Sacramento-San Joaquin River Delta. | Siemering, G. | 2006 | CMR | |
| Pyrethroids, Pyrethrins, and Piperonyl Butoxide in Sediments by High Resolution Gas Chromatography/High Resolution Mass Spectrometry | Woudneh, M.; Oros, D. | 2006 | CMR | |
| Microbial degradation of penoxsulam in flooded rice field soils | Jabusch, T.W.; Tjeerdema, R.S. | 2006 | HTML | CMR |
| Grassland Bypass Project Report 2003 | Grassland Bypass Project Oversight Committee | 2005 | CMR | |
| Castro Valley Atmospheric Deposition Study | Yee, D.; Franz, A. | 2005 | CMR | |
| Water Quality Improvements Are Critical to Waterfront Development: Lessons from Boston, San Francisco and Kitakyushu | Connor, M. | 2005 | CMR | |
| Pyrethroid Insecticides: An Analysis of Use Patterns, Distributions, Potential Toxicity and Fate in the Sacramento-San Joaquin Delta and Central Valley | Oros, D.; Werner, I. | 2005 | CMR | |
| Aquatics Herbicides: Overview of Usage, Fate and Transport, Potential Environmental Risk, and Future Recommendations for the Sacramento-San Joaquin Delta and Central Valley | Siemering, G.; Hayworth, J. | 2005 | CMR | |
| San Francisco Environmental Indicators Workshop (January 26, 2005): Summary Report | San Francisco Estuary Institute | 2005 | CMR | |
| Dissipation of penoxsulam, a new sulfonamide herbicide, in simulated rice field conditions | Jabusch, T.W.; Tjeerdema, R.S. | 2005 | CMR | |
| Control of Agricultural Drainage Water and Restoration of Wetland Water Supply Channels | David, N.; Eacock, C.; McGahan, J.; Beckon, W. | 2005 | CMR | |
| Sport fish contamination in the Bay-Delta watershed | Davis, J.A.; Greenfield, B.K. | 2004 | CMR | |
| Development of Environmental Indicators of the Condition of San Francisco Estuary | Thompson, B.; Gunther, A. | 2004 | CMR | |
| Monitoring Trace Organic Contamination in Central Valley Fish: Current Data and Future Steps. | Greenfield, B.; Wittner, E.; David, N.; Shonkoff, S.B.; Davis, J. | 2004 | CMR | |
| Review of Alternative Aquatic Pest Control Methods For California Waters | Greenfield, B.K.; David, N.; Hunt, J.; Wittmann, M.; Siemering, G. | 2004 | APMP CMR | |
| Legacy Pesticides in San Francisco Bay Conceptual Model/Impairment Assessment | Connor, M.; Davis, J.; Leatherbarrow, J.; Werme, C. | 2004 | CMR | |
| Dioxins in San Francisco Bay: Conceptual Model/Impairment Assessment | Connor, M.; Yee, D.; Davis, J.; Werme, C. | 2004 | CMR | |
| APMP Alternatives Program Executive Summary | Greenfield, B.K. | 2004 | APMP CMR | |
| Evaluation of Benthic Assessment Methodology in Southern California Bays and San Francisco Bay | Ranasinghe, J. A.; Thompson, B.; Smith, R.; Lowe, S. | 2004 | CMR | |
| Assessment of macrobenthos resonse to sediment contamination in the San Francisco Estuary, USA | Thompson, B. E.; Lowe, Sarah | 2004 | CMR | |
| Assessment of Macrobenthos Response to Sediment Contamination in the San Francisco Estuary (published in Environmental Toxicology and Chemistry) | Thompson, B.; Lowe, S. | 2004 | Link | CMR |
| Does shredding water hyacinths affect mercury speciation? | Hua, M.; Rajan, M.; Hackett, A.; Darrow, J.; Andrews, J.C.; Greenfield, B.K. | 2004 | APMP CMR | |
| Fish mercury in the Bay-Delta watershed: a dark cloud with a silver lining | Davis, J.A.; Greenfield, B.K.; Ichikawa, G.; Stephenson, M. | 2004 | CMR | |
| Conceptual Modeling of the Major Factors Controlling the Sources, Fate, and Effects of Persistent Organic Pollutants in the Estuary | Connor, M.; Davis, J; Leatherbarrow, J.; Yee, D.; Oros, D.; Ross, J.; Werme, C. | 2003 | CMR | |
| Causes of Sediment Toxicity to Mytilus galloprovincialis in San Francisco Bay, California (link to abstract of article published in Archives of Environmental Contamination and Toxicology) |